O94813

PTMD Annotation Information


※ Protein Information

Tag Content
UniProt Accession SLIT2_HUMAN; O94813;
Entrez ID 9353
GenBank Protein ID NM_001289135.2; NM_001289136.2; NM_004787.3;
GenBank Nucleotide ID NP_001276064.1; NP_001276065.1; NP_004778.1;
Protein Name Slit homolog 2 protein (Slit-2) [Cleaved into: Slit homolog 2 protein N-product; Slit homolog 2 protein C-product]
Gene Name SLIT2; SLIL3
Organism Homo sapiens
NCBI Taxa ID 9606
Functional DescriptionThought to act as molecular guidance cue in cellular migration, and function appears to be mediated by interaction with roundabout homolog receptors. During neural development involved in axonal navigation at the ventral midline of the neural tube and projection of axons to different regions. SLIT1 and SLIT2 seem to be essential for midline guidance in the forebrain by acting as repulsive signal preventing inappropriate midline crossing by axons projecting from the olfactory bulb. In spinal chord development may play a role in guiding commissur(view all)
Sequence
(Fasta)
MRGVGWQMLS LSLGLVLAIL NKVAPQACPA QCSCSGSTVD CHGLALRSVP RNIPRNTERL 60
DLNGNNITRI TKTDFAGLRH LRVLQLMENK ISTIERGAFQ DLKELERLRL NRNHLQLFPE 120
LLFLGTAKLY RLDLSENQIQ AIPRKAFRGA VDIKNLQLDY NQISCIEDGA FRALRDLEVL 180
TLNNNNITRL SVASFNHMPK LRTFRLHSNN LYCDCHLAWL SDWLRQRPRV GLYTQCMGPS 240
HLRGHNVAEV QKREFVCSGH QSFMAPSCSV LHCPAACTCS NNIVDCRGKG LTEIPTNLPE 300
TITEIRLEQN TIKVIPPGAF SPYKKLRRID LSNNQISELA PDAFQGLRSL NSLVLYGNKI 360
TELPKSLFEG LFSLQLLLLN ANKINCLRVD AFQDLHNLNL LSLYDNKLQT IAKGTFSPLR 420
AIQTMHLAQN PFICDCHLKW LADYLHTNPI ETSGARCTSP RRLANKRIGQ IKSKKFRCSA 480
KEQYFIPGTE DYRSKLSGDC FADLACPEKC RCEGTTVDCS NQKLNKIPEH IPQYTAELRL 540
NNNEFTVLEA TGIFKKLPQL RKINFSNNKI TDIEEGAFEG ASGVNEILLT SNRLENVQHK 600
MFKGLESLKT LMLRSNRITC VGNDSFIGLS SVRLLSLYDN QITTVAPGAF DTLHSLSTLN 660
LLANPFNCNC YLAWLGEWLR KKRIVTGNPR CQKPYFLKEI PIQDVAIQDF TCDDGNDDNS 720
CSPLSRCPTE CTCLDTVVRC SNKGLKVLPK GIPRDVTELY LDGNQFTLVP KELSNYKHLT 780
LIDLSNNRIS TLSNQSFSNM TQLLTLILSY NRLRCIPPRT FDGLKSLRLL SLHGNDISVV 840
PEGAFNDLSA LSHLAIGANP LYCDCNMQWL SDWVKSEYKE PGIARCAGPG EMADKLLLTT 900
PSKKFTCQGP VDVNILAKCN PCLSNPCKND GTCNSDPVDF YRCTCPYGFK GQDCDVPIHA 960
CISNPCKHGG TCHLKEGEED GFWCICADGF EGENCEVNVD DCEDNDCENN STCVDGINNY 1020
TCLCPPEYTG ELCEEKLDFC AQDLNPCQHD SKCILTPKGF KCDCTPGYVG EHCDIDFDDC 1080
QDNKCKNGAH CTDAVNGYTC ICPEGYSGLF CEFSPPMVLP RTSPCDNFDC QNGAQCIVRI 1140
NEPICQCLPG YQGEKCEKLV SVNFINKESY LQIPSAKVRP QTNITLQIAT DEDSGILLYK 1200
GDKDHIAVEL YRGRVRASYD TGSHPASAIY SVETINDGNF HIVELLALDQ SLSLSVDGGN 1260
PKIITNLSKQ STLNFDSPLY VGGMPGKSNV ASLRQAPGQN GTSFHGCIRN LYINSELQDF 1320
QKVPMQTGIL PGCEPCHKKV CAHGTCQPSS QAGFTCECQE GWMGPLCDQR TNDPCLGNKC 1380
VHGTCLPINA FSYSCKCLEG HGGVLCDEEE DLFNPCQAIK CKHGKCRLSG LGQPYCECSS 1440
GYTGDSCDRE ISCRGERIRD YYQKQQGYAA CQTTKKVSRL ECRGGCAGGQ CCGPLRSKRR 1500
KYSFECTDGS SFVDEVEKVV KCGCTRCVS

※ PTM-Disease Association

NumPTMDiseaseCell TypeTypePTM SitePMID
1MethylationCarcinomaD24287947
[Reference]: both Slit2 mRNA and protein expression were significantly down-regulated in renal cell carcinoma (RCC).

※ Disease Cross-ref Annotation

DatabaseAnnotation
CTD (Curated)
(count: 3)
MESH:D006528 ; Carcinoma, Hepatocellular
MESH:D004833 ; Epilepsy, Temporal Lobe
MESH:D055752 ; Small Cell Lung Carcinoma
GWASdb
(count: 27)
(view all)
rs500869; Urinary metabolites; kidney disease
rs715213; Blood pressure (response to angiotensin-converting enzyme inhibitor); hypertension
rs17609702; Type 2 diabetes; type 2 diabetes mellitus
rs6849536; Brain lesion load; multiple sclerosis
rs666088; Echocardiographic traits; cardiovascular system disease
rs522501; Triglycerides; coronary artery disease|lipid metabolism disorder|arteriosclerosis

※ PTM Sites

PTM Modification Sites
Phosphorylation
(count: 5)
135       KLYRLDLSENQIQAI     dbPAF
1510      SFECTDGSSFVDEVE     dbPAF
484       RCSAKEQYFIPGTED     dbPAF
489       EQYFIPGTEDYRSKL     dbPAF
492       FIPGTEDYRSKLSGD     dbPAF
Ubiquitination
(count: 2)
289       NIVDCRGKGLTEIPT     PLMD
72        NNITRITKTDFAGLR     PLMD

※ Protein-Protein Interaction

NetworkInteraction
ABSource